Protein ZmC3H30
ZmC3H30 is a protein in the C3H family.
Information
TF Name: ZmC3H30
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H30
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmC3H30

ZmC3H30 is a protein in the C3H family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00076PF00642PF16131PF16367PF18044PF18345
Zm00001eb063190_T002
Zm00001eb063190_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d034710DAPseq no logo sequence fimo position
Zm00001d034710DAPseq no logo sequence fimo position
Zm00001d034710ChIPseq no logo sequence fimo position
Zm00001d034710PChIPseq no logo sequence fimo position

Interactions where ZmC3H30 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H30 is the target  
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There are 72 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb063190_T002 from maize genome v5

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF16367
PF00076
PF16131
PF00642
PF18345
PF18044
PF16131
PF18044
PF00642
PF18345
PF18044
Hover here to show all domains

Nucleotide Sequence
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AGGTCTAGCGAAATCCAAAAGCCCG...

GRMZM2G123876_T01 from maize genome v3


Related TFome: pUT3066

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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GTGGGCCGCGGGCCGGGCAGCACGG...

GRMZM2G123876_T02 from maize genome v3

Amino Acid Sequence
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MPPFDYIWCSFSLFRSVSFLVIITETV

Nucleotide Sequence
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TATAGAGTAGTTGCCCACATATTCT...

Zm00001d034710_T001 from maize genome v4

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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GTTCGACCCCAAACACCGACTGACC...

Zm00001d034710_T002 from maize genome v4

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVVLIFIVLACLISHGKDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECN
RGASCRYSHDEQRNANTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPS
RSERYGDRESRSRHDDRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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GTTCGACCCCAAACACCGACTGACC...

Zm00001d034710_T003 from maize genome v4

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVVLIFIVLACLISHGKDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECN
RGASCRYSHDEQRNANTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPS
RSERYGDRESRSRHDDRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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GTTCGACCCCAAACACCGACTGACC...

Zm00001d034710_T004 from maize genome v4

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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AATCCGCCGCTGTTCGAGTAGTCGG...

Zm00001d034710_T005 from maize genome v4

Amino Acid Sequence
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MNNENEPLLPATASAAACATQKEPYSPVEILYWTEARFQKVRP

Nucleotide Sequence
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GTTTACTGGTTAATCTTCAGCTAGG...

Zm00001eb063190_T001 from maize genome v5

Amino Acid Sequence
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MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFA
FLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNA
NTGWGSKEDSGARWEHDKHSDVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Nucleotide Sequence
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AGGTCTAGCGAAATCCAAAAGCCCG...


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